BimCore Education

Project for BIOS 560 / 570 A dataset will be given to you that has already been normalized / scaled. You will use this dataset to explore different statistcal algorithms in different programs and summarize your efforts in a presentation and report to be turned in on the last day of class December 3, 2003. The Following issues / questions need to be addressed: Description of analysis tool and possible scenarios of when you would want to use it. Using this tool, analyze the data given and explain the results obtained and their meaning. Describe the different parameters associated with the analytical tool that are available and what they mean. Explore how changing parameters within the tool changes the results obtained. Summarize your findings with a recommendation of how to use the analytical tool chosen and with what parameters. Project Assignment Data Set

Tutorials Text file to R Available Software R / Bioconductor GeneSpring Spotfire Affymetrix SAM D-Chip Analysis Methods (work individually or in groups) Multiple Hypothesis Testing - Lydia Kwee Predictive Hierarchical Clustering SOM Clustering - Sameera Rukshan ANOVA - Amin Momim T-test vs ANOVA vs Clustering QT vs Correlated Coefficient vs SOM Filter and Clustering vs Clustering and Filter

New Student Opportunities: Molecular Graphics Programmers	Post Docs & Fellows: Opportunites for visiting fellows

© 2001 Emory University For information contact: Kim Gernert Last Update: 05/14/2001