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Sequence Analysis Capabilities |
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Module/Info |
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Assemble sequences
- Trim poor data and remove vector
- Manage and order contigs
- Locate potential SNPs
- Visualize traces and compare two consensus calls
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SeqMan Pro |
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Discover and annotate genes
- Predict coding regions and splice sites
- Locate repeats, patterns, or areas matching known sequence data
- Simulate agarose gel electrophoresis
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GeneQuest |
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Predict protein structures
- View PAGE simulations
- Analyze physico-chemical properties
- Display results graphically
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Protean |
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Align DNA and protein sequences
- Perform pairwise, multiple and dotplot alignments
- Create phylogenetic trees
- Generate subalignments
- Customize alignment displays
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MegAlign |
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Design primers or compare your own primers against a sequence template
- Analyze primers for hairpins and dimers
- View the consequences of primer mutations
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PrimerSelect |
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Locate restriction sites
- Create six types of linear and circular maps
- View all six reading frames with sites and features
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SeqBuilder |
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Edit and import sequences and annotations
- Translate, back-translate and reverse complement sequences
- Locate ORFs and create annotations
- Cut/paste sequence with inclusive annotations
- EditSeq included with all systems
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EditSeq |